BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031D05SP1|AL429384
(992 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1727 1951 0.0
>3x_Contig1727
Length = 17872
Score = 1951 bits (982), Expect = 0.0
Identities = 984/986 (99%)
Strand = Plus / Minus
Query: 1 gatccactcgataaaacgtggttgttccaacttaaacatgctactctatccacatgccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1234 gatccactcgataaaacgtggttgttccaacttaaacatgctactctatccacatgccca 1175
Query: 61 gagagggttcgaatacatttgttctttaaaacatcatatatctcaactataccactggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1174 gagagggttcgaatacatttgttctttaaaacatcatatatctcaactataccactggat 1115
Query: 121 aaccctacagctaagtgagaaccggaatcgacccagcttaaacttgtaaaatcagactct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1114 aaccctacagctaagtgagaaccggaatcgacccagcttaaacttgtaaaatcagactct 1055
Query: 181 gaagtggccaaatgggtaacgtcatttgtagtgttatccgaaaggaaaattgatttaccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1054 gaagtggccaaatgggtaacgtcatttgtagtgttatccgaaaggaaaattgatttaccc 995
Query: 241 aatgccactgccaaaacatcggtactggaccaatcaatcaagtcgtagtagaaatcatct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 994 aatgccactgccaaaacatcggtactggaccaatcaatcaagtcgtagtagaaatcatct 935
Query: 301 gctaaagatggagcatctaaaactctgtacggtaccttagcgatctctctaaatttcttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 934 gctaaagatggagcatctaaaactctgtacggtaccttagcgatctctctaaatttcttt 875
Query: 361 cctggggatagcaataatttttgtgactctggtcgcattggagataacgattggmaatac 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 874 cctggggatagcaataatttttgtgactctggtcgcattggagataacgattggaaatac 815
Query: 421 tggttgttcatcatcgatgcggtagcatttggtcccaaatccaaattcgaagagtgtaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 tggttgttcatcatcgatgcggtagcatttggtcccaaatccaaattcgaagagtgtaat 755
Query: 481 cgattggattgtgacctagatccataactgaataagcttacacccttcgtgctgtttgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 cgattggattgtgacctagatccataactgaataagcttacacccttcgtgctgtttgaa 695
Query: 541 gtaggtctatgtgaatcatgatgcaagamacttgaatggtttcgtctaggtgtggttgga 600
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 694 gtaggtctatgtgaatcatgatgcaagaaacttgaatggtttcgtctaggtgtggttgga 635
Query: 601 ggttccgagtttaagttctgataagtttgctcttcgtcttcatcagtatcgccaccatct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 ggttccgagtttaagttctgataagtttgctcttcgtcttcatcagtatcgccaccatct 575
Query: 661 ctatgcccgctaggaggtgtcgtaggtctttccaaagattcagagtattgaattctagat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 ctatgcccgctaggaggtgtcgtaggtctttccaaagattcagagtattgaattctagat 515
Query: 721 atcgtatcaccactattagaatcagtgtttagaagttccccgaataattcgttcttcaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 atcgtatcaccactattagaatcagtgtttagaagttccccgaataattcgttcttcaat 455
Query: 781 acgatatcaaaagtctgatgagcctgacgttccctttcccattccaaacggttatctgac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 acgatatcaaaagtctgatgagcctgacgttccctttcccattccaaacggttatctgac 395
Query: 841 ccattagaaggcttgaaagccggtatacttgggtttgacctgattgaactgacggtattc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ccattagaaggcttgaaagccggtatacttgggtttgacctgattgaactgacggtattc 335
Query: 901 aaatccatttccgtcctattaggtatgaatctgtcagcaaatccagaaccagctgaagaa 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aaatccatttccgtcctattaggtatgaatctgtcagcaaatccagaaccagctgaagaa 275
Query: 961 gtggacctgggtcgtcttactggaga 986
||||||||||||||||||||||||||
Sbjct: 274 gtggacctgggtcgtcttactggaga 249
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6191
Number of Sequences: 1807
Number of extensions: 6191
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 992
length of database: 10,358,551
effective HSP length: 16
effective length of query: 976
effective length of database: 10,329,639
effective search space: 10081727664
effective search space used: 10081727664
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)